# poreture

**Repository Path**: xkc1995/poreture

## Basic Information

- **Project Name**: poreture
- **Description**: Centerline Extraction, Skeletonization Methods, and Interbranch/Pore Segment Measurements.
- **Primary Language**: Python
- **License**: BSD-3-Clause
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 1
- **Forks**: 0
- **Created**: 2019-10-25
- **Last Updated**: 2024-10-12

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

Poreture
==========================

The "poreture" package implements centerline extraction and skeletonization methods.

References:
-----------

TL Kline, M Zamir, EL Ritman, 
"Accuracy of microvascular measurements obtained from micro-CT images,"
Annals of biomedical engineering 38 (9), 2851-2864, 2010.

TL Kline, EL Ritman,
"Characterization of the pore labyrinth geometry of sea sponges imaged by micro-CT,"
Journal of Porous Materials 19 (2), 141-151, 2012.


Maintainers
-----------

    - Timothy Lee Kline

Contributors
------------
    - Timothy Lee Kline
    - Adrian Hecker

Dependencies
------------

The required dependencies to build the software are:

  - python
  - numpy
  - scipy
  - skfmm
  - nibabel

Install
-------

This packages uses distutils, which is the default way of installing python modules. To install in your home directory, use:

    python setup.py install --home

To install for all users on Unix/Linux:

    python setup.py build
    sudo python setup.py install

Development
-----------

Follow: Fork + Pull Model:

    https://help.github.com/articles/using-pull-requests