# MEGAX CC

**Repository Path**: theing/megax-cc

## Basic Information

- **Project Name**: MEGAX CC
- **Description**: 这是一个MEGAX的内核，使用命令行运行，可配合其他编程语言批量打处理生物信息打文件。
我已经提取了帮助信息，在megax_help.txt可以查看，也可以输入megacc -h查看帮助信息。
- **Primary Language**: Unknown
- **License**: Not specified
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 1
- **Created**: 2020-12-23
- **Last Updated**: 2022-10-18

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README


MEGA (Molecular Evolutionary Genetics Analysis) Computational Core
Authors: Koichiro Tamura, Glen Stecher, and Sudhir Kumar
URL: http://www.megasoftware.net/
License: See the usageAgreement.txt file
 
MEGA-CC is the command-line version of MEGA that implements its core
analysis functions and is useful for iterative and automated execution.
MEGA-CC requires as input, a MEGA Analysis Options (.mao) file which can only
be generated using the MEGA X GUI application. The .mao file specifies the 
analysis to run as well as the analysis settings to use. If you do not already
have MEGA X, it can be downloaded from http://www.megasoftware.net. The MEGA X
GUI application also contains documentation and a tutorial for using MEGA-CC.

An example of how to run MEGA-CC is:

  megacc -a myMaoFile.mao -d mySequenceAlignment.fas -o myOutput

In addition to the megacc binary executable, a folder of example data 
files (Examples), a usageAgreement.txt file, and a man page (megacc.1) are included in the MEGA-CC
archive.