# dynguidelines

**Repository Path**: bioxfu/dynguidelines

## Basic Information

- **Project Name**: dynguidelines
- **Description**: No description available
- **Primary Language**: Unknown
- **License**: MIT
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2021-11-10
- **Last Updated**: 2024-07-16

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README


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# Selecting the most optimal TI methods

This package summarises the results from the
[dynbenchmark](https://www.github.com/dynverse/dynbenchmark) evaluation
of trajectory inference methods. Both programmatically and through a
(shiny) app, users can select the most optimal set of methods given a
set of user and dataset specific parameters.

Installing the app:

``` r
# install.packages("devtools")
devtools::install_github("dynverse/dynguidelines")
```

Running the app:

``` r
dynguidelines::guidelines_shiny()
```

See [dyno](https://www.github.com/dynverse/dyno) for more information on
how to use this package to infer and interpret trajectories.

<!-- This gif was recorded using peek (https://github.com/phw/peek) --->

![demo](man/figures/demo.gif)

## Latest changes

Check out `news(package = "dynguidelines")` or [NEWS.md](NEWS.md) for a
full list of changes.

<!-- This section gets automatically generated from NEWS.md -->

### Recent changes in dynguidelines 1.0.1 (29-06-2020)

#### Fixes

  - Fix `get_questions()`: Remove accidental reliance on list name
    autocompletion, which has been removed from R.

#### Minor changes

  - Migrate from Travis CI to Github Actions for CMD check and codecov,
    not yet for automated deployment.

### Recent changes in dynguidelines 1.0 (29-03-2019)

#### Minor changes

  - Remove dyneval dependency
  - Minor changes due to changes in dynwrap v1.0