# bio_scripts

**Repository Path**: LiuFan-fan/bio_scripts

## Basic Information

- **Project Name**: bio_scripts
- **Description**: No description available
- **Primary Language**: Unknown
- **License**: MIT
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2020-11-03
- **Last Updated**: 2020-12-19

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

Bio_scripts
========

Practical, reusable scripts for bioinformatics .

    sequence        tools for FASTA/Q files: fasta2tab, tab2fasta,
                    fasta_extract_by_pattern, fasta_common_seqs,
                    fasta_locate_motif, fasta_remove_duplicates,
                    fastx_translate, fasta_gc_skew.plot ...
    util            moved to https://github.com/shenwei356/datakit
    plot            plot scripts: heatmap ...

    blast           NCBI BLAST+ wrappers
    file_formats    genbank->gtf, bam2gff, gff2fa ...
    enzyme          analysis of restrict enzymes
    protein         Batch compute pI of protein

    biology         get insert from sanger sequencing result

    for_education   scripts with detail comments, for education
    not_used        older version of some scripts


See README in sub derectories.

-------

Copyright (c) 2014-2015, Wei Shen (shenwei356@gmail.com)


[MIT License](https://github.com/shenwei356/bio_scripts/blob/master/LICENSE)